Browse of TCMCG062C28356 protein

CDS

Accession Number	TCMCG062C28356
gbkey	CDS
Protein Id	XP_024542032.1
Location	complement(join(1355454..1355620,1355672..1355801,1355849..1355948,1356022..1356101,1356153..1356290,1356345..1356631,1356691..1356853,1356903..1357007,1357053..1357234,1357290..1357468,1357521..1357612,1357658..1357787,1357834..1358327,1358379..1358561,1358607..1358690,1358738..1358806,1358865..1358939,1358993..1359046,1359098..1359200,1359251..1359335,1359383..1359477,1359523..1359809,1359861..1359979,1360042..1360101,1360215..1360380))
Gene	LOC9647440
GeneID	9647440
Organism	Selaginella moellendorffii

Protein

Length	1208aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA50439
db_source	XM_024686264.1
Definition	DNA mismatch repair protein MSH6 isoform X4 [Selaginella moellendorffii]

EGGNOG-MAPPER Annotation

COG_category	L
Description	Component of the post-replicative DNA mismatch repair system (MMR)
KEGG_TC	-
KEGG_Module	M00295        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K08737        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko01524        [VIEW IN KEGG] ko03430        [VIEW IN KEGG] ko05200        [VIEW IN KEGG] ko05210        [VIEW IN KEGG] map01524        [VIEW IN KEGG] map03430        [VIEW IN KEGG] map05200        [VIEW IN KEGG] map05210        [VIEW IN KEGG]
GOs	GO:0000217        [VIEW IN EMBL-EBI] GO:0000404        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003684        [VIEW IN EMBL-EBI] GO:0003690        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006290        [VIEW IN EMBL-EBI] GO:0006298        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008094        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0030983        [VIEW IN EMBL-EBI] GO:0032135        [VIEW IN EMBL-EBI] GO:0032300        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043570        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGCCGCATCGAAGGAGCAGCGGCGGCGGTAGCGGTGGAGGAGGCGGCGCCGCGGCCAAGCAGCAGCGCAGCATTGCGTCTTTCTTTTCTCCCGCTGCTCCATCGCCAGCGGCAAAGAAGGTTTTGGTGATCAATGATGCGACTATCGCTGCTAGTAATCCAGCTTTGTCACCGAAAACTCATGATCGACAAGAAGAAGATACTGGAAAAAACGATAGAACTGCACCAAATGAGGAAAGAGATGATGAGAAAAGCAAAGAGTCTCCGCTAAAGAGGCCGGCGGATGACAATGTATGTGGAAGTCCTCCAGCGGAGTCTAGTAAATCACTCAAAAGACTGAAGCAGAAGGTCGTTTTGGAAGATGGTGACGACGAGGAGTTCCTTGAGAAGATGGATTTGGAGAACAGTCATTGTGGAAAAACTCGAAGAAGTTCTTCTGTTTCTTCAGCAGGTGCAGCAGTCAAAACGTCGGATGGTTTGGGAGCTCCGAGGAAAAGGCTGAGAAAGAAGTACGTGGTGGCTTCTTCAGACGATGATAGTGGCTGTGAAGTGAAAGGTGCCGATGTCAAAGAAAAACGAACGATGGAGGACGAAGCGACGATCGGAGAAATTCCGAAAGAAGATACCAGACAGCGAGCTGAAGAACTCGAAAAAATTACACGGTTCAAAGAGGAAACTGTTCGGCAGATAGAACCTGCCACAACGAGAGCGGATGAGTGTTGTGAGGCCGATCGCTCACTACTGCTGAGTGGTGAAGCACTTGAACGTTTTGGCGGTCGAATCTCAAGAAAATTCAGCTTTCTTGGCAAGAACCGCAAGGATTCTTCAGGAAGGCGCCATGACTGGCCAAATTTTGATTCTCGAACACTTTTTTTGCCGGCCGAGTTTGTGAAAGGGCTCACAGGAGGCCAGAGGCAATGGTGGGAATTCAAGGCCAAACACATGGATAAAGTTCTTCTTTTTAAGATGGGGAAGTTCTACGAAATGTTTGAGATGGATGCACATGTTGGAGCTCAAGACCTTGATCTGCAGTACATGAAGGGTGAGCAGCCGCATTGTGGCTTCCCGGAAAAGAATTATTTTGAGAATGTAGAGAAGCTAGTTCGAAAGGGGCATCGAGTGTTGGTGGTGGAGCAAACGGAGACACCAGAACAGCTTGAAGAACGCAAGAGAAAAACGGGCAGCAAAGACAAGGTTGTAAGACGTGAAATATGTGCGATCATAACTAAGGGAACCATGGTGGACTCTGGTATGATTAGTGACAATGCGGAGCCCTCCTTCCTTGCTGCAGTAACAGAGAAGGCGGACAATTATGGAGGTTCTTTGGTCGGACTTTGCGTGGTAGATGCCTCCAGGGCTTTATTTATGCTCGGTCAGGTCGAGGATGACTCCGCAAGGACGAAACTCAGATCTATATTGACAGAACTGAGGCCTGTCGAACTAGTCTTGCCGCTTGGCTTGCTGACGGACGCTACTCAAAAGGCCTTACGCGAACAAACAAGAAAACCATTGATCAGTCAACTTGTACCTTCAAAAGAGTTCTGGGACGCTGAACAGACAACCAAAGAGATTCGCACCAGTTATGGAGCTTCAGACGTGATGCCTACCGTTCTTCAAAAAATTCTCGAGCTTGGTGTTTCGTCAGAACCAGTTTTATCTGCTTTTGGGGGCTGCATTTGTTACTTGAGGCAATCGCTTCTTGATGGTCAGCTCCTCCAGCTTGGGAGGTTCGAGTTGCTTCCAGGATCGGACCTGTCATTCGAACATTCAGCCGCTATTCCTGAAGCCGCAGAAGCTCACATGGTACTTGACAGTGCTGCTTTGGATAACTTGGAAATATTGGAAAACTCTTCCAATTGTGGAGTGGCAGGGACTCTTTTGTGTTTACTCGACCACTGCATAACACCATTCGGAAGACGTCTATTGAAGCAGTGGATTGTCAGGCCTCTTTGCAATATTGAATCCATTGTGCAACGGCAAAATGCCGTCGTAGATATGCAGGGTGTGGCGGAAAATGCAGTTTCAGAATTTCGACGGGAGCTCTCTGGTATTCCGGACCTTGAAAGACTTCTAGCTCGACTCAGTGCAAACAGTGGGGAAAATGGGAGGCATTCGCAGAAGGTTGTGCTGTATGAAGATGCTGCAAAGAAGCAGATCAAGGAACTCGTTGCGGCACTTCGGGGCTTTCAGAAACTTGTCAAAGCTGTATCTTGTTTCGGCAATTGTCTGCCGCAGCTCAAATCAGCTCGCCTGCGGTCTTTATTGACCTTTGGGAAAGGATTTCCTGATTTGAAGCCTCTTCTGCAGTATTTTGAGGATTCCTTTGACTGGTCGGAGTCAGAAGCAAATGGTCGAGTAACCGGTGGTGATCATAGCAACTTATCGGCATCTGATCCCAGAGAAAAACTCGAGAGCTACCTGAAGAGCCAGCAAAAGTTTTTCAAAAATCCAGAGCAGATTTCTTACGTGACTGTTGGGAAGGATACTTACCTGCTTGAGATACCCGAAGAGCTGCATACTAAAGTGCCTTCAGATTACGAACTTCGCTCGTCTAGAAAGGGTTTCTGTCGATACTGGACACCAAGGGTGAAAGAGCTGTTGCAAGAGCTTAGCCTTTGTGAAAACGAGAAGGAAGCTGCTCTGAGAGGCATACTCCAAACTCTTACTAAGCGCTTTTGTGACGATCACGATCACTGGCTCTCTGCTATTCGAGCTGTTTCTGAATTGGATGCTCTTATGAGCATATCGTCTGCCCGGTTGCACATGGATGGAATGACGTGCTTGCCAACGTTTGTCCCAGCAAGTCAACTTGCAAAGCCGGTTTTTAGAGCCAAAGCCTTACGACATCCTATAGTGGCTGTTAGTACTGCTGCAAGCACTCCTTTTGTTCCGAACGATGTTGTTCTCGGTGGCGGAAGCAATCCAGAGGTTATGCTTTTGACAGGGCCCAATATGGGTGGCAAGTCGACTTTGCTTCGTCAAGTATGTCTGGGAATGATACTCGCACAGATTGGTTCAGAGGTTCCAGCTGAGTCGCTCGAGCTTTCCCTTACGGATAGATTATTCGTTCGTATGGGAGCCAAGGATCAAATCATGACAGGTCAAAGCACATTCTTGATTGAACTACTGGAAACCGCTGTTATGCTGCGCTGTGCAACTCAAAACTCGTTTGTGGCTCTGGACGAGCTTGGACGTGGAACAGCAACCTCAGACGGCCAAGCTATAGCGCACGCCGTGCTCCATTATCTAGCACACAACGTCCAATGTCGGGGAATGTTTTCTTCTCACTACCACAAACTTGCAAGCGATTTTGCGAATGACCCTTCCGTGTCTTTGTGCCATATGGCATGCAAGGTTGGAGGTGGAAATAACGAGCTGGAAGCAGTAACATTCCTCTACAAACTCACTTCTGGCTCTTGCCCGAAGAGTTATGGCGTCAACGTCGCACGAATAGCAGGAATGCCAGAGAGCGTGTTGCGCAGAGCCGCACTACAGTCTGCCAAACTCGAGAAAGAAGTGGAATCTCACTGTCACGAAGCGGACGTCATCAAAACCATCCTCGATGCCTCTGTTGACAGTGCGGAACAACTTCGCACGGCTTGGGAGAAGGCAAAACTTATATAA

Protein:   MAPHRRSSGGGSGGGGGAAAKQQRSIASFFSPAAPSPAAKKVLVINDATIAASNPALSPKTHDRQEEDTGKNDRTAPNEERDDEKSKESPLKRPADDNVCGSPPAESSKSLKRLKQKVVLEDGDDEEFLEKMDLENSHCGKTRRSSSVSSAGAAVKTSDGLGAPRKRLRKKYVVASSDDDSGCEVKGADVKEKRTMEDEATIGEIPKEDTRQRAEELEKITRFKEETVRQIEPATTRADECCEADRSLLLSGEALERFGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEFKAKHMDKVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLVRKGHRVLVVEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFLAAVTEKADNYGGSLVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLGLLTDATQKALREQTRKPLISQLVPSKEFWDAEQTTKEIRTSYGASDVMPTVLQKILELGVSSEPVLSAFGGCICYLRQSLLDGQLLQLGRFELLPGSDLSFEHSAAIPEAAEAHMVLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLLKQWIVRPLCNIESIVQRQNAVVDMQGVAENAVSEFRRELSGIPDLERLLARLSANSGENGRHSQKVVLYEDAAKKQIKELVAALRGFQKLVKAVSCFGNCLPQLKSARLRSLLTFGKGFPDLKPLLQYFEDSFDWSESEANGRVTGGDHSNLSASDPREKLESYLKSQQKFFKNPEQISYVTVGKDTYLLEIPEELHTKVPSDYELRSSRKGFCRYWTPRVKELLQELSLCENEKEAALRGILQTLTKRFCDDHDHWLSAIRAVSELDALMSISSARLHMDGMTCLPTFVPASQLAKPVFRAKALRHPIVAVSTAASTPFVPNDVVLGGGSNPEVMLLTGPNMGGKSTLLRQVCLGMILAQIGSEVPAESLELSLTDRLFVRMGAKDQIMTGQSTFLIELLETAVMLRCATQNSFVALDELGRGTATSDGQAIAHAVLHYLAHNVQCRGMFSSHYHKLASDFANDPSVSLCHMACKVGGGNNELEAVTFLYKLTSGSCPKSYGVNVARIAGMPESVLRRAALQSAKLEKEVESHCHEADVIKTILDASVDSAEQLRTAWEKAKLI